{"id":32044,"date":"2014-03-15T17:16:23","date_gmt":"2014-03-15T16:16:23","guid":{"rendered":"https:\/\/oneearth-oneocean.com\/2014\/03\/15\/288\/"},"modified":"2022-12-20T22:39:20","modified_gmt":"2022-12-20T21:39:20","slug":"288","status":"publish","type":"post","link":"https:\/\/oneearth-oneocean.com\/en\/atlantic-en\/2014\/288\/","title":{"rendered":"Naphthalene biodegradation in temperate and arctic marine microcosms Biodegradation"},"content":{"rendered":"<pre><a href=\"http:\/\/link.springer.com\/article\/10.1007\/s10532-013-9644-3\" target=\"_blank\" rel=\"noopener\">http:\/\/link.springer.com\/article\/10.1007\/s10532-013-9644-3<\/a>\n\nAndrea Bagi, Daniela M. Pampanin, Anders Lanz&amp;eacute;n, Torleiv Bilstad, Roald\nKommedal\nNaphthalene biodegradation in temperate and arctic marine microcosms\nBiodegradation\nFebruary 2014, Volume 25, Issue 1, pp 111-125\nDOI 10.1007\/s10532-013-9644-3\nAbstract: Naphthalene, the smallest polycyclic aromatic hydrocarbon\n(PAH), is found in abundance in crude oil, its major source in marine\nenvironments. PAH removal occurs via biodegradation, a key process\ndetermining their fate in the sea. Adequate estimation of PAH\nbiodegradation rates is essential for environmental risk assessment and\nresponse planning using numerical models such as the oil spill\ncontingency and response (OSCAR) model. Using naphthalene as a model\ncompound, biodegradation rate, temperature response and bacterial\ncommunity composition of seawaters from two climatically different areas\n(North Sea and Arctic Ocean) were studied and compared. Naphthalene\ndegradation was followed by measuring oxygen consumption in closed\nbottles using the OxiTop&amp;reg; system. Microbial communities of untreated and\nnaphthalene exposed samples were analysed by polymerase chain reaction\ndenaturing gradient gel electrophoresis (PCR&amp;ndash;DGGE) and pyrosequencing.\nThree times higher naphthalene degradation rate coefficients were\nobserved in arctic seawater samples compared to temperate, at all\nincubation temperatures. Rate coefficients at in situ temperatures were\nhowever, similar (0.048 day&amp;minus;1 for temperate and 0.068 day&amp;minus;1 for arctic).\nNaphthalene biodegradation rates decreased with similar Q10 ratios (3.3\nand 3.5) in both seawaters. Using the temperature compensation method\nimplemented in the OSCAR model, Q10 = 2, biodegradation in arctic\nseawater was underestimated when calculated from the measured temperate\nk1 value, showing that temperature difference alone could not predict\nbiodegradation rates adequately. Temperate and arctic untreated seawater\ncommunities were different as revealed by pyrosequencing. Geographic\norigin of seawater affected the community composition of exposed samples.\nKeywords: Hydrocarbons; Naphthalene; Biodegradation; Q10;\nPyrosequencing; DGGE; Seawater<\/pre>\n","protected":false},"excerpt":{"rendered":"<p>http:\/\/link.springer.com\/article\/10.1007\/s10532-013-9644-3 Andrea Bagi, Daniela M. Pampanin, Anders Lanz&amp;eacute;n, Torleiv Bilstad, Roald Kommedal Naphthalene biodegradation in temperate and arctic marine microcosms Biodegradation February 2014, Volume 25, Issue 1, pp 111-125 DOI 10.1007\/s10532-013-9644-3 Abstract: Naphthalene, the smallest polycyclic aromatic hydrocarbon (PAH), is found in abundance in crude oil, its major source in marine environments. PAH removal occurs via biodegradation, a key process determining their fate in the sea. Adequate estimation of PAH biodegradation rates is essential for environmental risk assessment and response planning using numerical models such as the oil spill contingency and response (OSCAR) model. Using naphthalene as a model compound, biodegradation rate, temperature response and bacterial community composition of seawaters from two climatically different areas (North Sea and Arctic Ocean) were studied and compared. Naphthalene degradation was followed by measuring oxygen consumption in closed bottles using the OxiTop&amp;reg; system. Microbial communities of untreated and naphthalene exposed samples were analysed by polymerase chain reaction denaturing gradient gel electrophoresis (PCR&amp;ndash;DGGE) and pyrosequencing. Three times higher naphthalene degradation rate coefficients were observed in arctic seawater samples compared to temperate, at all incubation temperatures. Rate coefficients at in situ temperatures were however, similar (0.048 day&amp;minus;1 for temperate and 0.068 day&amp;minus;1 for arctic). Naphthalene biodegradation rates decreased with similar Q10 ratios (3.3 and 3.5) in both seawaters. Using the temperature compensation method implemented in the OSCAR model, Q10 = 2, biodegradation in arctic seawater was underestimated when calculated from the measured temperate k1 value, showing that temperature difference alone could not predict biodegradation rates adequately. Temperate and arctic untreated seawater communities were different as revealed by pyrosequencing. Geographic origin of seawater affected the community composition of exposed samples. Keywords: Hydrocarbons; Naphthalene; Biodegradation; Q10; Pyrosequencing; DGGE; Seawater<\/p>\n","protected":false},"author":7,"featured_media":0,"comment_status":"open","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[3504,3415,3572,3423],"tags":[3460,3724,3725],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v24.1 - https:\/\/yoast.com\/wordpress\/plugins\/seo\/ -->\n<title>Naphthalene biodegradation in temperate and arctic marine microcosms Biodegradation - One Earth - One Ocean e. V.<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/oneearth-oneocean.com\/en\/atlantic-en\/2014\/288\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Naphthalene biodegradation in temperate and arctic marine microcosms Biodegradation - One Earth - One Ocean e. V.\" \/>\n<meta property=\"og:description\" content=\"http:\/\/link.springer.com\/article\/10.1007\/s10532-013-9644-3 Andrea Bagi, Daniela M. Pampanin, Anders Lanz&amp;eacute;n, Torleiv Bilstad, Roald Kommedal Naphthalene biodegradation in temperate and arctic marine microcosms Biodegradation February 2014, Volume 25, Issue 1, pp 111-125 DOI 10.1007\/s10532-013-9644-3 Abstract: Naphthalene, the smallest polycyclic aromatic hydrocarbon (PAH), is found in abundance in crude oil, its major source in marine environments. PAH removal occurs via biodegradation, a key process determining their fate in the sea. Adequate estimation of PAH biodegradation rates is essential for environmental risk assessment and response planning using numerical models such as the oil spill contingency and response (OSCAR) model. Using naphthalene as a model compound, biodegradation rate, temperature response and bacterial community composition of seawaters from two climatically different areas (North Sea and Arctic Ocean) were studied and compared. Naphthalene degradation was followed by measuring oxygen consumption in closed bottles using the OxiTop&amp;reg; system. Microbial communities of untreated and naphthalene exposed samples were analysed by polymerase chain reaction denaturing gradient gel electrophoresis (PCR&amp;ndash;DGGE) and pyrosequencing. Three times higher naphthalene degradation rate coefficients were observed in arctic seawater samples compared to temperate, at all incubation temperatures. Rate coefficients at in situ temperatures were however, similar (0.048 day&amp;minus;1 for temperate and 0.068 day&amp;minus;1 for arctic). Naphthalene biodegradation rates decreased with similar Q10 ratios (3.3 and 3.5) in both seawaters. Using the temperature compensation method implemented in the OSCAR model, Q10 = 2, biodegradation in arctic seawater was underestimated when calculated from the measured temperate k1 value, showing that temperature difference alone could not predict biodegradation rates adequately. Temperate and arctic untreated seawater communities were different as revealed by pyrosequencing. Geographic origin of seawater affected the community composition of exposed samples. Keywords: Hydrocarbons; Naphthalene; Biodegradation; Q10; Pyrosequencing; DGGE; Seawater\" \/>\n<meta property=\"og:url\" content=\"https:\/\/oneearth-oneocean.com\/en\/atlantic-en\/2014\/288\/\" \/>\n<meta property=\"og:site_name\" content=\"One Earth - One Ocean e. V.\" \/>\n<meta property=\"article:publisher\" content=\"https:\/\/www.facebook.com\/oeoo.world\/\" \/>\n<meta property=\"article:published_time\" content=\"2014-03-15T16:16:23+00:00\" \/>\n<meta property=\"article:modified_time\" content=\"2022-12-20T21:39:20+00:00\" \/>\n<meta name=\"author\" content=\"guenther\" \/>\n<meta name=\"twitter:card\" content=\"summary_large_image\" \/>\n<meta name=\"twitter:label1\" content=\"Written by\" \/>\n\t<meta name=\"twitter:data1\" content=\"guenther\" \/>\n\t<meta name=\"twitter:label2\" content=\"Est. reading time\" \/>\n\t<meta name=\"twitter:data2\" content=\"1 minute\" \/>\n<script type=\"application\/ld+json\" class=\"yoast-schema-graph\">{\"@context\":\"https:\/\/schema.org\",\"@graph\":[{\"@type\":\"Article\",\"@id\":\"https:\/\/oneearth-oneocean.com\/en\/atlantic-en\/2014\/288\/#article\",\"isPartOf\":{\"@id\":\"https:\/\/oneearth-oneocean.com\/en\/atlantic-en\/2014\/288\/\"},\"author\":{\"name\":\"guenther\",\"@id\":\"https:\/\/oneearth-oneocean.com\/en\/#\/schema\/person\/26a277b5ecd59a031fa6bd9553b40717\"},\"headline\":\"Naphthalene biodegradation in temperate and arctic marine microcosms Biodegradation\",\"datePublished\":\"2014-03-15T16:16:23+00:00\",\"dateModified\":\"2022-12-20T21:39:20+00:00\",\"mainEntityOfPage\":{\"@id\":\"https:\/\/oneearth-oneocean.com\/en\/atlantic-en\/2014\/288\/\"},\"wordCount\":9,\"commentCount\":0,\"publisher\":{\"@id\":\"https:\/\/oneearth-oneocean.com\/en\/#organization\"},\"keywords\":[\"Biodegradation\",\"Hydrocarbons\",\"Naphthalene\"],\"articleSection\":[\"2014\",\"Atlantic\",\"North sea\",\"research\"],\"inLanguage\":\"en-US\",\"potentialAction\":[{\"@type\":\"CommentAction\",\"name\":\"Comment\",\"target\":[\"https:\/\/oneearth-oneocean.com\/en\/atlantic-en\/2014\/288\/#respond\"]}]},{\"@type\":\"WebPage\",\"@id\":\"https:\/\/oneearth-oneocean.com\/en\/atlantic-en\/2014\/288\/\",\"url\":\"https:\/\/oneearth-oneocean.com\/en\/atlantic-en\/2014\/288\/\",\"name\":\"Naphthalene biodegradation in temperate and arctic marine microcosms Biodegradation - One Earth - One Ocean e. 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Adequate estimation of PAH biodegradation rates is essential for environmental risk assessment and response planning using numerical models such as the oil spill contingency and response (OSCAR) model. Using naphthalene as a model compound, biodegradation rate, temperature response and bacterial community composition of seawaters from two climatically different areas (North Sea and Arctic Ocean) were studied and compared. Naphthalene degradation was followed by measuring oxygen consumption in closed bottles using the OxiTop&amp;reg; system. Microbial communities of untreated and naphthalene exposed samples were analysed by polymerase chain reaction denaturing gradient gel electrophoresis (PCR&amp;ndash;DGGE) and pyrosequencing. Three times higher naphthalene degradation rate coefficients were observed in arctic seawater samples compared to temperate, at all incubation temperatures. Rate coefficients at in situ temperatures were however, similar (0.048 day&amp;minus;1 for temperate and 0.068 day&amp;minus;1 for arctic). Naphthalene biodegradation rates decreased with similar Q10 ratios (3.3 and 3.5) in both seawaters. Using the temperature compensation method implemented in the OSCAR model, Q10 = 2, biodegradation in arctic seawater was underestimated when calculated from the measured temperate k1 value, showing that temperature difference alone could not predict biodegradation rates adequately. Temperate and arctic untreated seawater communities were different as revealed by pyrosequencing. Geographic origin of seawater affected the community composition of exposed samples. Keywords: Hydrocarbons; Naphthalene; Biodegradation; Q10; Pyrosequencing; DGGE; Seawater","og_url":"https:\/\/oneearth-oneocean.com\/en\/atlantic-en\/2014\/288\/","og_site_name":"One Earth - One Ocean e. 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